Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco3Q8BQM7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm6222-201ENSMUST00000120787 396 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Rpph1-201ENSMUST00000175096 319 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm29310-201ENSMUST00000185468 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21825-201ENSMUST00000185728 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm29109-201ENSMUST00000185895 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21896-201ENSMUST00000186520 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21873-201ENSMUST00000186728 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21794-201ENSMUST00000187056 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21880-201ENSMUST00000187275 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21826-201ENSMUST00000187451 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21198-201ENSMUST00000188393 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21749-201ENSMUST00000189343 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21901-201ENSMUST00000189568 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm29424-201ENSMUST00000189716 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm28599-201ENSMUST00000189838 694 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21867-201ENSMUST00000189917 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm29269-201ENSMUST00000190087 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21722-201ENSMUST00000190153 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm28423-201ENSMUST00000190701 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21899-201ENSMUST00000190745 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21910-201ENSMUST00000191163 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21849-201ENSMUST00000191571 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm28678-201ENSMUST00000191593 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm20910-201ENSMUST00000193268 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm21871-201ENSMUST00000194621 696 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 AA619741-201ENSMUST00000195095 646 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smco3Q8BQM7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms