Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm20426-201ENSMUST00000173657 440 ntBASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm8494-201ENSMUST00000178171 1233 ntBASIC18.55■□□□□ 0.56
Usp54Q8BL06 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm15459-201ENSMUST00000117405 1941 ntBASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm8355-201ENSMUST00000177767 1941 ntBASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC18.55■□□□□ 0.56
Usp54Q8BL06 AC154680.1-201ENSMUST00000224376 859 ntBASIC18.55■□□□□ 0.56
Usp54Q8BL06 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp54Q8BL06 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Gm45433-201ENSMUST00000209386 247 ntBASIC18.54■□□□□ 0.56
Usp54Q8BL06 Gm45770-201ENSMUST00000212105 616 ntBASIC18.54■□□□□ 0.56
Usp54Q8BL06 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp54Q8BL06 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Usp54Q8BL06 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 AC122197.2-201ENSMUST00000219196 1635 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm12015-201ENSMUST00000117065 843 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm32999-201ENSMUST00000192693 562 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm17812-201ENSMUST00000204935 318 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm18393-201ENSMUST00000208349 1131 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm45598-202ENSMUST00000210719 986 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Gm10312-201ENSMUST00000078515 489 ntBASIC18.53■□□□□ 0.56
Usp54Q8BL06 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp54Q8BL06 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.52■□□□□ 0.56
Usp54Q8BL06 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Usp54Q8BL06 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms