Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smg1Q8BKX6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smg1Q8BKX6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Gm15547-201ENSMUST00000122152 333 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Mt1-202ENSMUST00000211807 1085 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smg1Q8BKX6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm22138-201ENSMUST00000158748 128 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm43610-201ENSMUST00000199117 365 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Gm8584-201ENSMUST00000171982 758 ntBASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smg1Q8BKX6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smg1Q8BKX6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smg1Q8BKX6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms