Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc40Q8BI79 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm15770-201ENSMUST00000117498 584 ntBASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm9522-201ENSMUST00000182394 926 ntBASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm17795-201ENSMUST00000214505 757 ntBASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Gm20445-201ENSMUST00000061905 565 ntBASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc40Q8BI79 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm12151-201ENSMUST00000121374 290 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm15487-201ENSMUST00000122373 465 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm24694-201ENSMUST00000180054 110 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gm27663-201ENSMUST00000184839 110 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms