Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim6Q8BGE7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm8410-201ENSMUST00000117225 605 ntBASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm13385-201ENSMUST00000121089 220 ntBASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm4804-201ENSMUST00000182234 999 ntBASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.14□□□□□ -0.15
Trim6Q8BGE7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim6Q8BGE7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Gm9229-201ENSMUST00000222777 126 ntBASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim6Q8BGE7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Gm28630-201ENSMUST00000187806 498 ntBASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Gm5779-201ENSMUST00000218467 910 ntBASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim6Q8BGE7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim6Q8BGE7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.11□□□□□ -0.15
Trim6Q8BGE7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim6Q8BGE7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim6Q8BGE7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms