Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm28911-201ENSMUST00000188837 117 ntBASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm45841-201ENSMUST00000207700 164 ntBASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gm45384-201ENSMUST00000210451 277 ntBASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atg4bQ8BGE6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atg4bQ8BGE6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atg4bQ8BGE6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atg4bQ8BGE6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms