Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pif1Q80SX8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm12403-201ENSMUST00000121384 959 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.31□□□□□ -0.44
Pif1Q80SX8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pif1Q80SX8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm43822-201ENSMUST00000200285 476 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.3□□□□□ -0.44
Pif1Q80SX8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pif1Q80SX8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pif1Q80SX8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms