Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm18905-201ENSMUST00000205454 928 ntBASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.85□□□□□ -0.67
Vma21Q78T54 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Vma21Q78T54 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vma21Q78T54 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm15678-201ENSMUST00000117573 960 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm6736-201ENSMUST00000166583 948 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.84□□□□□ -0.67
Vma21Q78T54 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Vma21Q78T54 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.84□□□□□ -0.67
Vma21Q78T54 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vma21Q78T54 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Vma21Q78T54 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm25948-201ENSMUST00000175334 112 ntBASIC10.83□□□□□ -0.68
Vma21Q78T54 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm8396-201ENSMUST00000057361 823 ntBASIC10.83□□□□□ -0.68
Vma21Q78T54 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms