Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.2□□□□□ -0.62
Rif1Q6PR54 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.2□□□□□ -0.62
Rif1Q6PR54 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm22138-201ENSMUST00000158748 128 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm8738-201ENSMUST00000172606 329 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm9726-201ENSMUST00000180321 678 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm37666-201ENSMUST00000194110 866 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm23949-201ENSMUST00000104027 127 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm5257-201ENSMUST00000121823 790 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Rprl1-202ENSMUST00000198476 238 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm45120-201ENSMUST00000208880 408 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.19□□□□□ -0.62
Rif1Q6PR54 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rif1Q6PR54 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rif1Q6PR54 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.18□□□□□ -0.62
Rif1Q6PR54 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms