Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Gm15276-201ENSMUST00000145953 498 ntBASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.4■□□□□ 0.06
Nup98Q6PFD9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup98Q6PFD9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
Nup98Q6PFD9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup98Q6PFD9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm44405-201ENSMUST00000198952 126 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm45224-201ENSMUST00000208203 414 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm5363-201ENSMUST00000211927 938 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm14208-201ENSMUST00000119645 678 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm15547-201ENSMUST00000122152 333 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm26461-201ENSMUST00000175064 290 ntBASIC15.38■□□□□ 0.05
Nup98Q6PFD9 Gm25732-201ENSMUST00000175168 60 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms