Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm5364-201ENSMUST00000216789 889 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Rnf220Q6PDX6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf220Q6PDX6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf220Q6PDX6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf220Q6PDX6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf220Q6PDX6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf220Q6PDX6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms