Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Gm14767-201ENSMUST00000121559 586 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd3Q6P9Z1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm27680-201ENSMUST00000184192 160 ntBASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Gm43703-201ENSMUST00000200523 763 ntBASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd3Q6P9Z1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd3Q6P9Z1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Mir874-201ENSMUST00000104769 76 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm27618-201ENSMUST00000183671 60 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm27321-201ENSMUST00000185021 205 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms