Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm13689-201ENSMUST00000119360 685 ntBASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm38144-201ENSMUST00000192790 465 ntBASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sp140Q6NSQ5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Auts2-212ENSMUST00000178555 309 ntBASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Gm2423-201ENSMUST00000074863 733 ntBASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sp140Q6NSQ5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.48□□□□□ -0.25
Sp140Q6NSQ5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms