Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VclQ64727 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.08□□□□□ -0.31
VclQ64727 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VclQ64727 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.08□□□□□ -0.32
VclQ64727 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.08□□□□□ -0.32
VclQ64727 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.08□□□□□ -0.32
VclQ64727 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Gm13612-201ENSMUST00000119276 390 ntBASIC13.08□□□□□ -0.32
VclQ64727 Gm11814-201ENSMUST00000119515 929 ntBASIC13.08□□□□□ -0.32
VclQ64727 Gm15824-201ENSMUST00000119516 955 ntBASIC13.08□□□□□ -0.32
VclQ64727 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.08□□□□□ -0.32
VclQ64727 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.08□□□□□ -0.32
VclQ64727 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.08□□□□□ -0.32
VclQ64727 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Gm43433-201ENSMUST00000196573 481 ntBASIC13.08□□□□□ -0.32
VclQ64727 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
VclQ64727 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.08□□□□□ -0.32
VclQ64727 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
VclQ64727 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.08□□□□□ -0.32
VclQ64727 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
VclQ64727 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.08□□□□□ -0.32
VclQ64727 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VclQ64727 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.08□□□□□ -0.32
VclQ64727 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.07□□□□□ -0.32
VclQ64727 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.07□□□□□ -0.32
VclQ64727 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Gm27839-201ENSMUST00000184242 106 ntBASIC13.07□□□□□ -0.32
VclQ64727 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.07□□□□□ -0.32
VclQ64727 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.07□□□□□ -0.32
VclQ64727 Gm16372-201ENSMUST00000073088 450 ntBASIC13.07□□□□□ -0.32
VclQ64727 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VclQ64727 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VclQ64727 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.07□□□□□ -0.32
VclQ64727 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VclQ64727 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.06□□□□□ -0.32
VclQ64727 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.06□□□□□ -0.32
VclQ64727 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.06□□□□□ -0.32
VclQ64727 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms