Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc3Q64519 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc3Q64519 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm13829-201ENSMUST00000119600 138 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm17150-201ENSMUST00000165577 381 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm38223-201ENSMUST00000194484 695 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm6266-201ENSMUST00000203844 806 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.82□□□□□ -0.36
Sdc3Q64519 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.82□□□□□ -0.36
Sdc3Q64519 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc3Q64519 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm11425-201ENSMUST00000119608 498 ntBASIC12.81□□□□□ -0.36
Sdc3Q64519 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.81□□□□□ -0.36
Sdc3Q64519 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm38671-201ENSMUST00000200573 130 ntBASIC12.81□□□□□ -0.36
Sdc3Q64519 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.81□□□□□ -0.36
Sdc3Q64519 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm9396-201ENSMUST00000076703 567 ntBASIC12.81□□□□□ -0.36
Sdc3Q64519 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Sdc3Q64519 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
Sdc3Q64519 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Sdc3Q64519 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms