Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.17□□□□□ -0.46
VcanQ62059 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.17□□□□□ -0.46
VcanQ62059 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC12.17□□□□□ -0.46
VcanQ62059 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
VcanQ62059 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.17□□□□□ -0.46
VcanQ62059 Mir6998-201ENSMUST00000183343 64 ntBASIC12.17□□□□□ -0.46
VcanQ62059 Gm44329-201ENSMUST00000197469 112 ntBASIC12.17□□□□□ -0.46
VcanQ62059 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.17□□□□□ -0.46
VcanQ62059 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Gm10312-201ENSMUST00000078515 489 ntBASIC12.17□□□□□ -0.46
VcanQ62059 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VcanQ62059 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.16□□□□□ -0.46
VcanQ62059 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.16□□□□□ -0.46
VcanQ62059 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.16□□□□□ -0.46
VcanQ62059 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.16□□□□□ -0.46
VcanQ62059 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.16□□□□□ -0.46
VcanQ62059 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.16□□□□□ -0.46
VcanQ62059 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
VcanQ62059 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VcanQ62059 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
VcanQ62059 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.16□□□□□ -0.46
VcanQ62059 Gm28388-201ENSMUST00000186262 437 ntBASIC12.16□□□□□ -0.46
VcanQ62059 Gm43520-201ENSMUST00000197996 164 ntBASIC12.16□□□□□ -0.46
VcanQ62059 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.16□□□□□ -0.46
VcanQ62059 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VcanQ62059 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.15□□□□□ -0.46
VcanQ62059 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.15□□□□□ -0.46
VcanQ62059 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
VcanQ62059 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
VcanQ62059 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
VcanQ62059 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.15□□□□□ -0.46
VcanQ62059 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Mir698-201ENSMUST00000102164 109 ntBASIC12.15□□□□□ -0.46
VcanQ62059 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.15□□□□□ -0.46
VcanQ62059 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
VcanQ62059 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VcanQ62059 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
VcanQ62059 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms