Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Foxn1Q61575 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxn1Q61575 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxn1Q61575 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxn1Q61575 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.12■□□□□ 0.01
Foxn1Q61575 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxn1Q61575 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Foxn1Q61575 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxn1Q61575 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxn1Q61575 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm13408-201ENSMUST00000119822 798 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm13935-201ENSMUST00000121859 798 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm17208-201ENSMUST00000168388 535 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm8285-201ENSMUST00000208293 759 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Foxn1Q61575 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.11■□□□□ 0.01
Foxn1Q61575 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxn1Q61575 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.1■□□□□ 0.01
Foxn1Q61575 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Foxn1Q61575 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm32025-201ENSMUST00000217960 307 ntBASIC15.1■□□□□ 0.01
Foxn1Q61575 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.1■□□□□ 0.01
Foxn1Q61575 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Foxn1Q61575 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.1■□□□□ 0.01
Foxn1Q61575 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxn1Q61575 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.09■□□□□ 0.01
Foxn1Q61575 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxn1Q61575 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxn1Q61575 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms