Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm12403-201ENSMUST00000121384 959 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Gm17795-201ENSMUST00000214505 757 ntBASIC14.73□□□□□ -0.05
Ift88Q61371 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Ift88Q61371 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.73□□□□□ -0.05
Ift88Q61371 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ift88Q61371 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.72□□□□□ -0.05
Ift88Q61371 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.72□□□□□ -0.05
Ift88Q61371 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.72□□□□□ -0.05
Ift88Q61371 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
Ift88Q61371 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
Ift88Q61371 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.72□□□□□ -0.05
Ift88Q61371 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ift88Q61371 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Gm7775-201ENSMUST00000218871 853 ntBASIC14.72□□□□□ -0.05
Ift88Q61371 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ift88Q61371 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ift88Q61371 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ift88Q61371 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ift88Q61371 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.71□□□□□ -0.05
Ift88Q61371 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Ift88Q61371 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.71□□□□□ -0.05
Ift88Q61371 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Ift88Q61371 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.71□□□□□ -0.05
Ift88Q61371 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm9063-201ENSMUST00000223299 582 ntBASIC14.71□□□□□ -0.05
Ift88Q61371 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Ift88Q61371 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ift88Q61371 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms