Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ripk1Q60855 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.56□□□□□ -0.4
Ripk1Q60855 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm15376-201ENSMUST00000122258 783 ntBASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm7730-201ENSMUST00000212486 454 ntBASIC12.56□□□□□ -0.4
Ripk1Q60855 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.56□□□□□ -0.4
Ripk1Q60855 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ripk1Q60855 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm12403-201ENSMUST00000121384 959 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.55□□□□□ -0.4
Ripk1Q60855 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.55□□□□□ -0.4
Ripk1Q60855 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ripk1Q60855 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ripk1Q60855 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.54□□□□□ -0.4
Ripk1Q60855 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.54□□□□□ -0.4
Ripk1Q60855 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ripk1Q60855 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ripk1Q60855 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ripk1Q60855 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ripk1Q60855 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms