Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Col12a1Q60847 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Mir6923-201ENSMUST00000184592 72 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm43778-201ENSMUST00000199438 199 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Ginm1-202ENSMUST00000065124 300 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.8□□□□□ -0.36
Col12a1Q60847 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.8□□□□□ -0.36
Col12a1Q60847 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col12a1Q60847 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Gm5616-201ENSMUST00000165252 384 ntBASIC12.79□□□□□ -0.36
Col12a1Q60847 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Gm8741-201ENSMUST00000174736 384 ntBASIC12.79□□□□□ -0.36
Col12a1Q60847 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Mt1-202ENSMUST00000211807 1085 ntBASIC12.79□□□□□ -0.36
Col12a1Q60847 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.79□□□□□ -0.36
Col12a1Q60847 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.79□□□□□ -0.36
Col12a1Q60847 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col12a1Q60847 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col12a1Q60847 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.78□□□□□ -0.36
Col12a1Q60847 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.78□□□□□ -0.36
Col12a1Q60847 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.78□□□□□ -0.36
Col12a1Q60847 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm11980-201ENSMUST00000121445 986 ntBASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm27627-201ENSMUST00000183644 150 ntBASIC12.78□□□□□ -0.36
Col12a1Q60847 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col12a1Q60847 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col12a1Q60847 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Gm28388-201ENSMUST00000186262 437 ntBASIC12.77□□□□□ -0.36
Col12a1Q60847 Gm28071-201ENSMUST00000190355 478 ntBASIC12.77□□□□□ -0.36
Col12a1Q60847 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms