Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm13015-201ENSMUST00000118674 204 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm21470-201ENSMUST00000187680 696 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm45841-201ENSMUST00000207700 164 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dupd1-202ENSMUST00000224735 548 ntBASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm13385-201ENSMUST00000121089 220 ntBASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm18733-201ENSMUST00000173950 856 ntBASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm24420-201ENSMUST00000176676 59 ntBASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav15-1-dv6-1Q5R1D2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms