Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38aQ4FK66 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm11978-201ENSMUST00000122315 466 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Mir6420-201ENSMUST00000185032 102 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm6013-201ENSMUST00000212264 699 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm7399-201ENSMUST00000032395 858 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38aQ4FK66 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Gm38002-201ENSMUST00000193255 180 ntBASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38aQ4FK66 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Gm15198-201ENSMUST00000117283 177 ntBASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.48■□□□□ 0.07
Prpf38aQ4FK66 Gm28693-202ENSMUST00000190758 331 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms