Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vars2Q3U2A8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vars2Q3U2A8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vars2Q3U2A8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Vars2Q3U2A8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vars2Q3U2A8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Gm14058-201ENSMUST00000116082 735 ntBASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Gm19187-201ENSMUST00000206781 892 ntBASIC16.32■□□□□ 0.2
Vars2Q3U2A8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.32■□□□□ 0.2
Vars2Q3U2A8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vars2Q3U2A8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Gm13035-201ENSMUST00000117496 342 ntBASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.31■□□□□ 0.2
Vars2Q3U2A8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vars2Q3U2A8 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Gm23251-201ENSMUST00000103773 110 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Gm28071-201ENSMUST00000190355 478 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.3■□□□□ 0.2
Vars2Q3U2A8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vars2Q3U2A8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms