Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gm13453-201ENSMUST00000118708 357 ntBASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Shd-206ENSMUST00000225145 998 ntBASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43aQ3TL54 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Gm15393-201ENSMUST00000120499 219 ntBASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Gm28630-201ENSMUST00000187806 498 ntBASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43aQ3TL54 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm27306-201ENSMUST00000183970 107 ntBASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm5425-201ENSMUST00000214125 459 ntBASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43aQ3TL54 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms