Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm14822-201ENSMUST00000122247 291 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm6736-201ENSMUST00000166583 948 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccbe1Q3MI99 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccbe1Q3MI99 Daam2-202ENSMUST00000224595 1926 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm23935-201ENSMUST00000102303 57 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm24270-201ENSMUST00000102326 57 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm14494-201ENSMUST00000118786 435 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 Gm24245-201ENSMUST00000157318 57 ntBASIC12.02□□□□□ -0.49
Ccbe1Q3MI99 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms