Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.39□□□□□ -0.27
Pfdn6Q03958 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pfdn6Q03958 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.38□□□□□ -0.27
Pfdn6Q03958 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pfdn6Q03958 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm15321-201ENSMUST00000121290 288 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm43094-201ENSMUST00000196549 921 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm19078-201ENSMUST00000206311 727 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm20949-201ENSMUST00000206478 952 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.37□□□□□ -0.27
Pfdn6Q03958 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pfdn6Q03958 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms