Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.28□□□□□ -0.28
Col6a2Q02788 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a2Q02788 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a2Q02788 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a2Q02788 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a2Q02788 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.27□□□□□ -0.28
Col6a2Q02788 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a2Q02788 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col6a2Q02788 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Gm16177-201ENSMUST00000120728 718 ntBASIC13.27□□□□□ -0.29
Col6a2Q02788 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.27□□□□□ -0.29
Col6a2Q02788 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Col6a2Q02788 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a2Q02788 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Col6a2Q02788 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.26□□□□□ -0.29
Col6a2Q02788 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a2Q02788 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a2Q02788 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms