Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.6□□□□□ -0.39
Nkx3-2P97503 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx3-2P97503 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm15770-201ENSMUST00000117498 584 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Mir1982-201ENSMUST00000157368 74 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm27847-201ENSMUST00000183711 107 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm27375-201ENSMUST00000183799 107 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm29127-201ENSMUST00000188304 517 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.59□□□□□ -0.39
Nkx3-2P97503 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx3-2P97503 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.58□□□□□ -0.39
Nkx3-2P97503 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx3-2P97503 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm8213-201ENSMUST00000118191 441 ntBASIC12.58□□□□□ -0.4
Nkx3-2P97503 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm29649-201ENSMUST00000185649 419 ntBASIC12.58□□□□□ -0.4
Nkx3-2P97503 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm38671-201ENSMUST00000200573 130 ntBASIC12.58□□□□□ -0.4
Nkx3-2P97503 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.58□□□□□ -0.4
Nkx3-2P97503 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.58□□□□□ -0.4
Nkx3-2P97503 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx3-2P97503 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Gm13226-201ENSMUST00000117838 404 ntBASIC12.57□□□□□ -0.4
Nkx3-2P97503 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Gm6152-201ENSMUST00000151704 340 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms