Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cxcr4P70658 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcr4P70658 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.5□□□□□ -0.41
Cxcr4P70658 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm8927-201ENSMUST00000181978 981 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm28631-201ENSMUST00000190740 334 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcr4P70658 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm3222-201ENSMUST00000071282 990 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.5□□□□□ -0.41
Cxcr4P70658 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcr4P70658 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcr4P70658 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcr4P70658 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Cxcr4P70658 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcr4P70658 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.49□□□□□ -0.41
Cxcr4P70658 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.49□□□□□ -0.41
Cxcr4P70658 Gm19220-201ENSMUST00000222682 803 ntBASIC12.49□□□□□ -0.41
Cxcr4P70658 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcr4P70658 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcr4P70658 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms