Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Gm10176-201ENSMUST00000159707 2264 ntBASIC18.38■□□□□ 0.53
Stra8P70278 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Stra8P70278 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.38■□□□□ 0.53
Stra8P70278 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.38■□□□□ 0.53
Stra8P70278 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.38■□□□□ 0.53
Stra8P70278 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Stra8P70278 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Stra8P70278 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Stra8P70278 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stra8P70278 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.37■□□□□ 0.53
Stra8P70278 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Stra8P70278 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.37■□□□□ 0.53
Stra8P70278 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Gm3436-201ENSMUST00000179930 840 ntBASIC18.37■□□□□ 0.53
Stra8P70278 Mir7023-201ENSMUST00000185093 64 ntBASIC18.37■□□□□ 0.53
Stra8P70278 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.37■□□□□ 0.53
Stra8P70278 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.37■□□□□ 0.53
Stra8P70278 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Stra8P70278 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Stra8P70278 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.37■□□□□ 0.53
Stra8P70278 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Stra8P70278 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stra8P70278 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Stra8P70278 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Stra8P70278 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Stra8P70278 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.36■□□□□ 0.53
Stra8P70278 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC18.36■□□□□ 0.53
Stra8P70278 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.36■□□□□ 0.53
Stra8P70278 Gm15393-201ENSMUST00000120499 219 ntBASIC18.36■□□□□ 0.53
Stra8P70278 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.36■□□□□ 0.53
Stra8P70278 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.36■□□□□ 0.53
Stra8P70278 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Auts2-212ENSMUST00000178555 309 ntBASIC18.36■□□□□ 0.53
Stra8P70278 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.36■□□□□ 0.53
Stra8P70278 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.36■□□□□ 0.53
Stra8P70278 Gm45643-201ENSMUST00000211364 1484 ntBASIC18.36■□□□□ 0.53
Stra8P70278 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Mir497b-201ENSMUST00000093601 125 ntBASIC18.36■□□□□ 0.53
Stra8P70278 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Stra8P70278 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stra8P70278 AC125108.1-201ENSMUST00000218986 2330 ntBASIC18.35■□□□□ 0.53
Stra8P70278 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.35■□□□□ 0.53
Stra8P70278 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms