Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Gm22323-201ENSMUST00000103832 109 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.61□□□□□ -0.23
Ybx1P62960 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Gm6621-201ENSMUST00000193251 772 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.61□□□□□ -0.23
Ybx1P62960 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Gm6023-201ENSMUST00000118217 606 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 Gm12363-201ENSMUST00000122250 668 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 Gm2231-201ENSMUST00000125661 612 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ybx1P62960 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.6□□□□□ -0.23
Ybx1P62960 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.6□□□□□ -0.23
Ybx1P62960 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.6□□□□□ -0.23
Ybx1P62960 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.6□□□□□ -0.23
Ybx1P62960 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ybx1P62960 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ybx1P62960 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ybx1P62960 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ybx1P62960 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.59□□□□□ -0.23
Ybx1P62960 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.59□□□□□ -0.23
Ybx1P62960 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Ybx1P62960 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Ybx1P62960 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Ybx1P62960 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.59□□□□□ -0.23
Ybx1P62960 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.59□□□□□ -0.23
Ybx1P62960 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ybx1P62960 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.58□□□□□ -0.23
Ybx1P62960 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ybx1P62960 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms