Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.47□□□□□ -0.89
Rpl39P62892 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Rpl39P62892 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.47□□□□□ -0.89
Rpl39P62892 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.47□□□□□ -0.89
Rpl39P62892 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Rpl39P62892 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.47□□□□□ -0.89
Rpl39P62892 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39P62892 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39P62892 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Rpl39P62892 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39P62892 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39P62892 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39P62892 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39P62892 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
Rpl39P62892 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.46□□□□□ -0.89
Rpl39P62892 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39P62892 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39P62892 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.46□□□□□ -0.9
Rpl39P62892 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.46□□□□□ -0.9
Rpl39P62892 Gm13015-201ENSMUST00000118674 204 ntBASIC9.46□□□□□ -0.9
Rpl39P62892 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.46□□□□□ -0.9
Rpl39P62892 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Rpl39P62892 Gm18049-201ENSMUST00000208909 581 ntBASIC9.46□□□□□ -0.9
Rpl39P62892 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.46□□□□□ -0.9
Rpl39P62892 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Rpl39P62892 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.46□□□□□ -0.9
Rpl39P62892 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Rpl39P62892 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.46□□□□□ -0.9
Rpl39P62892 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.46□□□□□ -0.9
Rpl39P62892 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Rpl39P62892 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39P62892 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.45□□□□□ -0.9
Rpl39P62892 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 Gm1401-201ENSMUST00000122048 772 ntBASIC9.45□□□□□ -0.9
Rpl39P62892 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39P62892 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Rpl39P62892 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.45□□□□□ -0.9
Rpl39P62892 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.45□□□□□ -0.9
Rpl39P62892 Mir3113-201ENSMUST00000175478 76 ntBASIC9.45□□□□□ -0.9
Rpl39P62892 Mir8117-201ENSMUST00000184773 107 ntBASIC9.45□□□□□ -0.9
Rpl39P62892 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.45□□□□□ -0.9
Rpl39P62892 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms