Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vbp1P61759 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vbp1P61759 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.05□□□□□ -0.48
Vbp1P61759 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vbp1P61759 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vbp1P61759 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vbp1P61759 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vbp1P61759 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vbp1P61759 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Vbp1P61759 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Vbp1P61759 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vbp1P61759 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.04□□□□□ -0.48
Vbp1P61759 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vbp1P61759 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.03□□□□□ -0.48
Vbp1P61759 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vbp1P61759 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.03□□□□□ -0.48
Vbp1P61759 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vbp1P61759 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.03□□□□□ -0.48
Vbp1P61759 Gm6443-201ENSMUST00000203599 874 ntBASIC12.03□□□□□ -0.48
Vbp1P61759 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.03□□□□□ -0.48
Vbp1P61759 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.03□□□□□ -0.48
Vbp1P61759 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Vbp1P61759 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vbp1P61759 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vbp1P61759 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.03□□□□□ -0.48
Vbp1P61759 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vbp1P61759 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.02□□□□□ -0.48
Vbp1P61759 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.02□□□□□ -0.48
Vbp1P61759 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vbp1P61759 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vbp1P61759 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.02□□□□□ -0.49
Vbp1P61759 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vbp1P61759 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Gm7153-201ENSMUST00000117092 455 ntBASIC12.02□□□□□ -0.49
Vbp1P61759 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.02□□□□□ -0.49
Vbp1P61759 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.02□□□□□ -0.49
Vbp1P61759 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms