Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SmoP56726 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.36□□□□□ -0.27
SmoP56726 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SmoP56726 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.36□□□□□ -0.27
SmoP56726 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.36□□□□□ -0.27
SmoP56726 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.36□□□□□ -0.27
SmoP56726 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SmoP56726 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.36□□□□□ -0.27
SmoP56726 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SmoP56726 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SmoP56726 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SmoP56726 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SmoP56726 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
SmoP56726 Gm11978-201ENSMUST00000122315 466 ntBASIC13.35□□□□□ -0.27
SmoP56726 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.35□□□□□ -0.27
SmoP56726 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
SmoP56726 Gm27682-201ENSMUST00000183930 110 ntBASIC13.35□□□□□ -0.27
SmoP56726 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.35□□□□□ -0.27
SmoP56726 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.35□□□□□ -0.27
SmoP56726 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Gm10146-201ENSMUST00000072739 309 ntBASIC13.35□□□□□ -0.27
SmoP56726 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.35□□□□□ -0.27
SmoP56726 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.35□□□□□ -0.27
SmoP56726 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SmoP56726 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SmoP56726 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SmoP56726 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SmoP56726 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.34□□□□□ -0.27
SmoP56726 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SmoP56726 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.34□□□□□ -0.27
SmoP56726 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.34□□□□□ -0.27
SmoP56726 Snora78-201ENSMUST00000158630 128 ntBASIC13.34□□□□□ -0.27
SmoP56726 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Mir7221-201ENSMUST00000184009 72 ntBASIC13.34□□□□□ -0.27
SmoP56726 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.34□□□□□ -0.27
SmoP56726 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SmoP56726 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SmoP56726 Acot6-202ENSMUST00000222921 3622 ntBASIC13.34□□□□□ -0.27
SmoP56726 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms