Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.31□□□□□ -0.28
Fdft1P53798 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Fdft1P53798 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.31□□□□□ -0.28
Fdft1P53798 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fdft1P53798 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.3□□□□□ -0.28
Fdft1P53798 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Gm15321-201ENSMUST00000121290 288 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.3□□□□□ -0.28
Fdft1P53798 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Fdft1P53798 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.3□□□□□ -0.28
Fdft1P53798 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fdft1P53798 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fdft1P53798 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.29□□□□□ -0.28
Fdft1P53798 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.29□□□□□ -0.28
Fdft1P53798 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fdft1P53798 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.29□□□□□ -0.28
Fdft1P53798 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Fdft1P53798 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Gm28760-201ENSMUST00000185995 736 ntBASIC13.29□□□□□ -0.28
Fdft1P53798 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.29□□□□□ -0.28
Fdft1P53798 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fdft1P53798 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fdft1P53798 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fdft1P53798 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fdft1P53798 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Fdft1P53798 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms