Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cux1P53564 Sorbs3-204ENSMUST00000227929 2460 ntBASIC20.11■□□□□ 0.81
Cux1P53564 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Gm9083-201ENSMUST00000120423 819 ntBASIC20.11■□□□□ 0.81
Cux1P53564 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC20.11■□□□□ 0.81
Cux1P53564 Gm22334-201ENSMUST00000158070 133 ntBASIC20.11■□□□□ 0.81
Cux1P53564 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Gm7003-201ENSMUST00000195089 312 ntBASIC20.11■□□□□ 0.81
Cux1P53564 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC20.11■□□□□ 0.81
Cux1P53564 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC20.11■□□□□ 0.81
Cux1P53564 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC20.11■□□□□ 0.81
Cux1P53564 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux1P53564 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cux1P53564 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC20.1■□□□□ 0.81
Cux1P53564 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC20.1■□□□□ 0.81
Cux1P53564 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cux1P53564 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Gm5639-201ENSMUST00000122305 2403 ntBASIC20.1■□□□□ 0.81
Cux1P53564 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux1P53564 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cux1P53564 Gm44094-201ENSMUST00000204703 2030 ntBASIC20.09■□□□□ 0.81
Cux1P53564 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Cux1P53564 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Gm45925-201ENSMUST00000218882 744 ntBASIC20.09■□□□□ 0.81
Cux1P53564 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cux1P53564 Gm9025-201ENSMUST00000122415 1575 ntBASIC20.09■□□□□ 0.81
Cux1P53564 AC113060.1-201ENSMUST00000225689 1573 ntBASIC20.09■□□□□ 0.81
Cux1P53564 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cux1P53564 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC20.08■□□□□ 0.81
Cux1P53564 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC20.08■□□□□ 0.81
Cux1P53564 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC20.08■□□□□ 0.81
Cux1P53564 Gzmn-202ENSMUST00000225535 989 ntBASIC20.08■□□□□ 0.81
Cux1P53564 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cux1P53564 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cux1P53564 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cux1P53564 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC20.08■□□□□ 0.8
Cux1P53564 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 CU062626.3-201ENSMUST00000225522 1411 ntBASIC20.08■□□□□ 0.8
Cux1P53564 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cux1P53564 Gm43823-201ENSMUST00000197391 1808 ntBASIC20.08■□□□□ 0.8
Cux1P53564 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux1P53564 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cux1P53564 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cux1P53564 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cux1P53564 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cux1P53564 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms