Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pdx1P52946 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdx1P52946 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdx1P52946 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Gm5687-201ENSMUST00000118252 640 ntBASIC13.15□□□□□ -0.3
Pdx1P52946 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.15□□□□□ -0.3
Pdx1P52946 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.15□□□□□ -0.3
Pdx1P52946 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdx1P52946 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdx1P52946 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdx1P52946 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdx1P52946 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Pdx1P52946 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Pdx1P52946 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdx1P52946 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdx1P52946 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pdx1P52946 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.14□□□□□ -0.31
Pdx1P52946 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Pdx1P52946 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdx1P52946 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Itm2b-204ENSMUST00000228637 783 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pdx1P52946 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.14□□□□□ -0.31
Pdx1P52946 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pdx1P52946 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdx1P52946 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Pdx1P52946 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pdx1P52946 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pdx1P52946 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.13□□□□□ -0.31
Pdx1P52946 Gm6152-201ENSMUST00000151704 340 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdx1P52946 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdx1P52946 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.13□□□□□ -0.31
Pdx1P52946 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.13□□□□□ -0.31
Pdx1P52946 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms