Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ClgnP52194 Syt7-204ENSMUST00000223586 1344 ntBASIC13.61□□□□□ -0.23
ClgnP52194 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.61□□□□□ -0.23
ClgnP52194 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClgnP52194 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ClgnP52194 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.6□□□□□ -0.23
ClgnP52194 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClgnP52194 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClgnP52194 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.6□□□□□ -0.23
ClgnP52194 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm12151-201ENSMUST00000121374 290 ntBASIC13.6□□□□□ -0.23
ClgnP52194 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.6□□□□□ -0.23
ClgnP52194 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm9522-201ENSMUST00000182394 926 ntBASIC13.6□□□□□ -0.23
ClgnP52194 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClgnP52194 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.6□□□□□ -0.23
ClgnP52194 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.6□□□□□ -0.23
ClgnP52194 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.6□□□□□ -0.23
ClgnP52194 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.6□□□□□ -0.23
ClgnP52194 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClgnP52194 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.6□□□□□ -0.23
ClgnP52194 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ClgnP52194 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ClgnP52194 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.6□□□□□ -0.23
ClgnP52194 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClgnP52194 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
ClgnP52194 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.59□□□□□ -0.23
ClgnP52194 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Gm15321-201ENSMUST00000121290 288 ntBASIC13.59□□□□□ -0.23
ClgnP52194 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.59□□□□□ -0.23
ClgnP52194 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.59□□□□□ -0.23
ClgnP52194 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ClgnP52194 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClgnP52194 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClgnP52194 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.59□□□□□ -0.23
ClgnP52194 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms