Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Gm46209-201ENSMUST00000217912 553 ntBASIC11.68□□□□□ -0.54
GdnfP48540 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.68□□□□□ -0.54
GdnfP48540 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.68□□□□□ -0.54
GdnfP48540 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.68□□□□□ -0.54
GdnfP48540 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.68□□□□□ -0.54
GdnfP48540 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
GdnfP48540 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.67□□□□□ -0.54
GdnfP48540 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
GdnfP48540 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Gm44608-201ENSMUST00000206827 855 ntBASIC11.67□□□□□ -0.54
GdnfP48540 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.67□□□□□ -0.54
GdnfP48540 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.67□□□□□ -0.54
GdnfP48540 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.67□□□□□ -0.54
GdnfP48540 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
GdnfP48540 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
GdnfP48540 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
GdnfP48540 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
GdnfP48540 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
GdnfP48540 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
GdnfP48540 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.66□□□□□ -0.54
GdnfP48540 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
GdnfP48540 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.66□□□□□ -0.54
GdnfP48540 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.66□□□□□ -0.54
GdnfP48540 Gm37319-201ENSMUST00000193500 636 ntBASIC11.66□□□□□ -0.54
GdnfP48540 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.66□□□□□ -0.54
GdnfP48540 Gm44344-201ENSMUST00000200287 129 ntBASIC11.66□□□□□ -0.54
GdnfP48540 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.66□□□□□ -0.54
GdnfP48540 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gm44719-201ENSMUST00000206404 149 ntBASIC11.66□□□□□ -0.54
GdnfP48540 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
GdnfP48540 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
GdnfP48540 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
GdnfP48540 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.66□□□□□ -0.54
GdnfP48540 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
GdnfP48540 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms