Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Xcl1P47993 Gm11355-201ENSMUST00000121120 306 ntBASIC8.57□□□□□ -1.04
Xcl1P47993 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC8.57□□□□□ -1.04
Xcl1P47993 Gm12497-201ENSMUST00000138778 237 ntBASIC8.57□□□□□ -1.04
Xcl1P47993 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Trmt13-210ENSMUST00000198454 880 ntBASIC8.57□□□□□ -1.04
Xcl1P47993 Gm45747-201ENSMUST00000212203 999 ntBASIC8.57□□□□□ -1.04
Xcl1P47993 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC8.57□□□□□ -1.04
Xcl1P47993 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC8.57□□□□□ -1.04
Xcl1P47993 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Xcl1P47993 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.57□□□□□ -1.04
Xcl1P47993 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Xcl1P47993 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Xcl1P47993 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Xcl1P47993 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Xcl1P47993 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.56□□□□□ -1.04
Xcl1P47993 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.56□□□□□ -1.04
Xcl1P47993 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm10275-202ENSMUST00000168697 495 ntBASIC8.56□□□□□ -1.04
Xcl1P47993 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm20049-201ENSMUST00000219950 730 ntBASIC8.56□□□□□ -1.04
Xcl1P47993 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC8.56□□□□□ -1.04
Xcl1P47993 Gm10275-201ENSMUST00000092620 635 ntBASIC8.56□□□□□ -1.04
Xcl1P47993 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC8.56□□□□□ -1.04
Xcl1P47993 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Xcl1P47993 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Xcl1P47993 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Xcl1P47993 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Xcl1P47993 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Xcl1P47993 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms