Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm6745-201ENSMUST00000199216 526 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm45384-201ENSMUST00000210451 277 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.19□□□□□ -0.46
Nkx2-2P42586 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-2P42586 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.18□□□□□ -0.46
Nkx2-2P42586 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Gm14350-201ENSMUST00000116642 640 ntBASIC12.18□□□□□ -0.46
Nkx2-2P42586 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.18□□□□□ -0.46
Nkx2-2P42586 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.18□□□□□ -0.46
Nkx2-2P42586 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-2P42586 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.17□□□□□ -0.46
Nkx2-2P42586 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.17□□□□□ -0.46
Nkx2-2P42586 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-2P42586 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms