Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.9□□□□□ -0.34
TfamP40630 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.9□□□□□ -0.34
TfamP40630 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TfamP40630 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Mir6956-201ENSMUST00000183598 62 ntBASIC12.9□□□□□ -0.34
TfamP40630 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.9□□□□□ -0.34
TfamP40630 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.9□□□□□ -0.34
TfamP40630 Gm17330-201ENSMUST00000221047 165 ntBASIC12.9□□□□□ -0.34
TfamP40630 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.9□□□□□ -0.34
TfamP40630 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TfamP40630 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TfamP40630 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TfamP40630 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TfamP40630 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TfamP40630 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TfamP40630 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
TfamP40630 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
TfamP40630 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TfamP40630 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.89□□□□□ -0.35
TfamP40630 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TfamP40630 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
TfamP40630 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.89□□□□□ -0.35
TfamP40630 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.89□□□□□ -0.35
TfamP40630 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TfamP40630 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.89□□□□□ -0.35
TfamP40630 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TfamP40630 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.89□□□□□ -0.35
TfamP40630 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TfamP40630 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TfamP40630 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
TfamP40630 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.88□□□□□ -0.35
TfamP40630 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TfamP40630 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TfamP40630 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TfamP40630 Mir874-201ENSMUST00000104769 76 ntBASIC12.88□□□□□ -0.35
TfamP40630 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.88□□□□□ -0.35
TfamP40630 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.88□□□□□ -0.35
TfamP40630 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.88□□□□□ -0.35
TfamP40630 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TfamP40630 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms