Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC19.49■□□□□ 0.71
Chd1P40201 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC19.49■□□□□ 0.71
Chd1P40201 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Chd1P40201 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd1P40201 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.49■□□□□ 0.71
Chd1P40201 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Chd1P40201 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Chd1P40201 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chd1P40201 Gm5621-201ENSMUST00000187303 640 ntBASIC19.48■□□□□ 0.71
Chd1P40201 Gm43692-201ENSMUST00000198236 1062 ntBASIC19.48■□□□□ 0.71
Chd1P40201 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Gm3619-201ENSMUST00000219947 775 ntBASIC19.48■□□□□ 0.71
Chd1P40201 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chd1P40201 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.48■□□□□ 0.71
Chd1P40201 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chd1P40201 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Gm7902-201ENSMUST00000198842 947 ntBASIC19.48■□□□□ 0.71
Chd1P40201 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC19.48■□□□□ 0.71
Chd1P40201 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chd1P40201 AC122408.1-201ENSMUST00000218949 218 ntBASIC19.48■□□□□ 0.71
Chd1P40201 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chd1P40201 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd1P40201 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.47■□□□□ 0.71
Chd1P40201 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.47■□□□□ 0.71
Chd1P40201 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chd1P40201 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Gm14314-201ENSMUST00000118225 1015 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Gm5863-201ENSMUST00000121760 1008 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.47■□□□□ 0.71
Chd1P40201 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Gm8100-201ENSMUST00000182906 988 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Gm28388-201ENSMUST00000186262 437 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC19.47■□□□□ 0.71
Chd1P40201 Gm42518-201ENSMUST00000196277 938 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC19.47■□□□□ 0.71
Chd1P40201 Gm44158-201ENSMUST00000203881 505 ntBASIC19.47■□□□□ 0.71
Chd1P40201 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chd1P40201 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chd1P40201 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd1P40201 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Chd1P40201 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd1P40201 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Chd1P40201 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd1P40201 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC19.46■□□□□ 0.71
Chd1P40201 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd1P40201 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Gm9129-201ENSMUST00000218173 1689 ntBASIC19.46■□□□□ 0.71
Chd1P40201 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chd1P40201 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chd1P40201 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd1P40201 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Chd1P40201 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chd1P40201 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chd1P40201 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms