Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HmgclP38060 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.12□□□□□ -0.31
HmgclP38060 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.12□□□□□ -0.31
HmgclP38060 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HmgclP38060 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
HmgclP38060 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.11□□□□□ -0.31
HmgclP38060 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.11□□□□□ -0.31
HmgclP38060 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.11□□□□□ -0.31
HmgclP38060 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.11□□□□□ -0.31
HmgclP38060 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.11□□□□□ -0.31
HmgclP38060 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.11□□□□□ -0.31
HmgclP38060 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.11□□□□□ -0.31
HmgclP38060 Gm45384-201ENSMUST00000210451 277 ntBASIC13.11□□□□□ -0.31
HmgclP38060 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.11□□□□□ -0.31
HmgclP38060 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.11□□□□□ -0.31
HmgclP38060 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HmgclP38060 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HmgclP38060 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.11□□□□□ -0.31
HmgclP38060 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HmgclP38060 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
HmgclP38060 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.1□□□□□ -0.31
HmgclP38060 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.1□□□□□ -0.31
HmgclP38060 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HmgclP38060 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HmgclP38060 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Gm6152-201ENSMUST00000151704 340 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Gm19931-201ENSMUST00000198920 368 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Gm6745-201ENSMUST00000199216 526 ntBASIC13.1□□□□□ -0.31
HmgclP38060 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HmgclP38060 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HmgclP38060 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HmgclP38060 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.09□□□□□ -0.31
HmgclP38060 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms