Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox5P35710 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Sox5P35710 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox5P35710 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox5P35710 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox5P35710 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.53□□□□□ -0.08
Sox5P35710 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Gm13453-201ENSMUST00000118708 357 ntBASIC14.53□□□□□ -0.08
Sox5P35710 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.53□□□□□ -0.08
Sox5P35710 Gm27702-201ENSMUST00000184512 56 ntBASIC14.53□□□□□ -0.08
Sox5P35710 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox5P35710 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.53□□□□□ -0.08
Sox5P35710 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Sox5P35710 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox5P35710 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox5P35710 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.53□□□□□ -0.08
Sox5P35710 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox5P35710 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.52□□□□□ -0.09
Sox5P35710 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.52□□□□□ -0.09
Sox5P35710 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
Sox5P35710 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox5P35710 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox5P35710 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox5P35710 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox5P35710 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sox5P35710 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Gm23935-201ENSMUST00000102303 57 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Gm24270-201ENSMUST00000102326 57 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Gm14701-201ENSMUST00000117156 348 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Gm24245-201ENSMUST00000157318 57 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.51□□□□□ -0.09
Sox5P35710 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.51□□□□□ -0.09
Sox5P35710 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox5P35710 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.51□□□□□ -0.09
Sox5P35710 Gm5161-201ENSMUST00000075243 853 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.51□□□□□ -0.09
Sox5P35710 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox5P35710 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms