Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm22189-201ENSMUST00000103822 86 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm15460-201ENSMUST00000118147 391 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm8927-201ENSMUST00000181978 981 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Mir7085-201ENSMUST00000184353 66 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a11P31650 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm3222-201ENSMUST00000071282 990 ntBASIC12.66□□□□□ -0.38
Slc6a11P31650 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a11P31650 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a11P31650 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Gm21470-201ENSMUST00000187680 696 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 Gm6266-201ENSMUST00000203844 806 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.65□□□□□ -0.38
Slc6a11P31650 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a11P31650 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a11P31650 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc6a11P31650 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.64□□□□□ -0.39
Slc6a11P31650 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a11P31650 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm13385-201ENSMUST00000121089 220 ntBASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a11P31650 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Gm43703-201ENSMUST00000200523 763 ntBASIC12.64□□□□□ -0.39
Slc6a11P31650 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.64□□□□□ -0.39
Slc6a11P31650 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a11P31650 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms