Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc6a1P31648 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.46□□□□□ -0.58
Slc6a1P31648 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Slc6a1P31648 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc6a1P31648 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc6a1P31648 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc6a1P31648 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Slc6a1P31648 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Slc6a1P31648 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.45□□□□□ -0.58
Slc6a1P31648 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Slc6a1P31648 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm10576-201ENSMUST00000191927 825 ntBASIC11.45□□□□□ -0.58
Slc6a1P31648 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gm20553-201ENSMUST00000204205 844 ntBASIC11.45□□□□□ -0.58
Slc6a1P31648 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Slc6a1P31648 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Slc6a1P31648 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm6973-201ENSMUST00000117080 721 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm9385-201ENSMUST00000117563 472 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm15678-201ENSMUST00000117573 960 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm2810-201ENSMUST00000118681 990 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm13616-201ENSMUST00000120600 222 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.44□□□□□ -0.58
Slc6a1P31648 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Slc6a1P31648 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms