Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.88□□□□□ -0.03
Col2a1P28481 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm24830-201ENSMUST00000102024 166 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm25890-201ENSMUST00000177643 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm22614-201ENSMUST00000178300 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm26956-201ENSMUST00000182176 986 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm31256-201ENSMUST00000194705 506 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm45925-201ENSMUST00000218882 744 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Gm22042-201ENSMUST00000082989 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm26232-201ENSMUST00000083360 166 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm24136-201ENSMUST00000083374 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Gm26110-201ENSMUST00000083971 165 ntBASIC14.88□□□□□ -0.03
Col2a1P28481 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col2a1P28481 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.88□□□□□ -0.03
Col2a1P28481 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col2a1P28481 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col2a1P28481 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.87□□□□□ -0.03
Col2a1P28481 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.87□□□□□ -0.03
Col2a1P28481 AA914427-201ENSMUST00000193194 1166 ntBASIC14.87□□□□□ -0.03
Col2a1P28481 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.87□□□□□ -0.03
Col2a1P28481 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.87□□□□□ -0.03
Col2a1P28481 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.87□□□□□ -0.03
Col2a1P28481 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.87□□□□□ -0.03
Col2a1P28481 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col2a1P28481 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col2a1P28481 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col2a1P28481 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.86□□□□□ -0.03
Col2a1P28481 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col2a1P28481 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col2a1P28481 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col2a1P28481 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col2a1P28481 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Gm15703-201ENSMUST00000120250 880 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms