Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.38□□□□□ -0.75
Ccl6P27784 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl6P27784 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.38□□□□□ -0.75
Ccl6P27784 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.38□□□□□ -0.75
Ccl6P27784 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl6P27784 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl6P27784 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm12485-201ENSMUST00000119641 291 ntBASIC10.37□□□□□ -0.75
Ccl6P27784 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm27772-201ENSMUST00000184900 187 ntBASIC10.37□□□□□ -0.75
Ccl6P27784 Mir6977-201ENSMUST00000184960 64 ntBASIC10.37□□□□□ -0.75
Ccl6P27784 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccl6P27784 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.37□□□□□ -0.75
Ccl6P27784 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Ccl6P27784 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.37□□□□□ -0.75
Ccl6P27784 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl6P27784 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl6P27784 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.36□□□□□ -0.75
Ccl6P27784 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Ccl6P27784 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl6P27784 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Gm22189-201ENSMUST00000103822 86 ntBASIC10.36□□□□□ -0.75
Ccl6P27784 Gm15376-201ENSMUST00000122258 783 ntBASIC10.36□□□□□ -0.75
Ccl6P27784 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Ccl6P27784 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl6P27784 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.36□□□□□ -0.75
Ccl6P27784 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl6P27784 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms