Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.1□□□□□ -0.63
Col8a2P25318 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Col8a2P25318 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.09□□□□□ -0.63
Col8a2P25318 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 Gm13123-201ENSMUST00000122173 492 ntBASIC11.09□□□□□ -0.63
Col8a2P25318 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.09□□□□□ -0.63
Col8a2P25318 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.09□□□□□ -0.63
Col8a2P25318 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.09□□□□□ -0.63
Col8a2P25318 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col8a2P25318 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col8a2P25318 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.09□□□□□ -0.63
Col8a2P25318 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col8a2P25318 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Gm7029-201ENSMUST00000173226 450 ntBASIC11.08□□□□□ -0.64
Col8a2P25318 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.08□□□□□ -0.64
Col8a2P25318 Gm43630-201ENSMUST00000201550 776 ntBASIC11.08□□□□□ -0.64
Col8a2P25318 Gm10146-201ENSMUST00000072739 309 ntBASIC11.08□□□□□ -0.64
Col8a2P25318 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col8a2P25318 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col8a2P25318 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms